PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDR Structures for L2-12-*

Structures in cluster L2-12-*
Cluster	PDB	Resolution	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	Sequence	Ramachandran	Distance(°)
L2-12-*	7CZTL	EM	lambda	Homo.sapiens	Hu_IGLV5-37*01	100.0	Hu_IGLV5-37*01	100.0	YYysdsDKGQGS	BBBLBLABEBAL	-1
L2-12-*	7SO7L	3.59	lambda	Homo.sapiens	Hu_IGLV5-45*02	94.3	Hu_IGLV5-45*02	75.0	RYksglDKHQGS	ABABAABBBBBB	-1
L2-12-*	6KVAL	2.2	lambda	Homo.sapiens	Hu_IGLV5-45*02	94.3	Hu_IGLV5-45*02	100.0	RYksdsDKQQGS	BBABAABBBBBB	-1
L2-12-*	7CZTM	EM	lambda	Homo.sapiens	Hu_IGLV5-37*01	100.0	Hu_IGLV5-37*01	100.0	YYysdsDKGQGS	BBBLBLABEBAL	-1
L2-12-*	7SO7Y	3.59	lambda	Homo.sapiens	Hu_IGLV5-45*02	94.3	Hu_IGLV5-45*02	75.0	RYksglDKHQGS	BBLEAABEBBBB	-1
L2-12-*	6KVFC	2.79	lambda	Homo.sapiens	Hu_IGLV5-45*02	94.3	Hu_IGLV5-45*02	100.0	RYksdsDKQQGS	BBABAABBBBBB	-1
L2-12-*	6KVAl	2.2	lambda	Homo.sapiens	Hu_IGLV5-45*02	94.3	Hu_IGLV5-45*02	100.0	RYksdsDKQQGS	BBABAABBBBBB	-1
L2-12-*	6W7SL	2.25	lambda	Homo.sapiens	Hu_IGLV5-45*02	100.0	Hu_IGLV5-45*02	100.0	RYksdsDKQQGS	BBABAABBBBBB	-1
L2-12-*	6KVFL	2.79	lambda	Homo.sapiens	Hu_IGLV5-45*02	94.3	Hu_IGLV5-45*02	100.0	RYksdsDKQQGS	BBABAABBBBBB	-1
L2-12-*	6ID4D	2.4	lambda	Homo.sapiens	Hu_IGLV5-45*02	97.1	Hu_IGLV5-45*02	83.3	RYKsdpdKHQGS	BBABAABBBBBA	-1
L2-12-*	4KTEL	1.8	lambda	Macaca.mulatta	Ma_IGLV5S3*01	94.3	Ma_IGLV5S3*01	58.3	YYYSDsskyQGS	BBABAABBBBBB	-1
L2-12-*	6ID4L	2.4	lambda	Homo.sapiens	Hu_IGLV5-45*02	97.1	Hu_IGLV5-45*02	83.3	RYKsdpdKHQGS	BBABAABBBBBA	-1
L2-12-*	4KTDL	2	lambda	Macaca.mulatta	Ma_IGLV5S3*01	94.3	Ma_IGLV5S3*01	58.3	YyfsdSSQHQGS	BBABAABBBBBB	-1
L2-12-*	6A4KM	3.15	lambda	Homo.sapiens	Hu_IGLV4-69*01	89.7	Hu_IGLV4-69*01	50.0	NlssgGRHTRGD	BBBABLBBBBBB	-1
L2-12-*	5IFJH	2.35	lambda	Homo.sapiens	Hu_IGLV4-69*01	97.1	Hu_IGLV4-69*01	91.7	KVNsdgsHSKGD	BBBAAEEBBBBB	-1
L2-12-*	7TFNJ	EM	lambda	Macaca.mulatta	Ma_IGLV4S4*01	86.8	Ma_IGLV4S4*01	75.0	RldsvGSHTKVD	BBBAALBBBBBB	-1
L2-12-*	5IG7H	1.97	lambda	Homo.sapiens	Hu_IGLV4-69*01	97.1	Hu_IGLV4-69*01	91.7	KVNsdgsHSKGD	BBBAAEEBBBBB	-1
L2-12-*	5IFJE	2.35	lambda	Homo.sapiens	Hu_IGLV4-69*01	97.1	Hu_IGLV4-69*01	91.7	KVNsdgsHSKGD	BBBAAEEBBBBB	-1
L2-12-*	7TFNL	EM	lambda	Macaca.mulatta	Ma_IGLV4S4*01	86.8	Ma_IGLV4S4*01	75.0	RldsvGSHTKVD	BBBAALBBBBBB	-1
L2-12-*	5IG7E	1.97	lambda	Homo.sapiens	Hu_IGLV4-69*01	97.1	Hu_IGLV4-69*01	91.7	KVNsdgsHSKGD	BBBAAEEBBBBB	-1
L2-12-*	5IFJB	2.35	lambda	Homo.sapiens	Hu_IGLV4-69*01	97.1	Hu_IGLV4-69*01	91.7	KVNsdgsHSKGD	BBBAAEEBBBBB	-1
L2-12-*	5IG7B	1.97	lambda	Homo.sapiens	Hu_IGLV4-69*01	97.1	Hu_IGLV4-69*01	91.7	KVNsdgsHSKGD	BBBAAEEBBBBB	-1
L2-12-*	5IFJK	2.35	lambda	Homo.sapiens	Hu_IGLV4-69*01	97.1	Hu_IGLV4-69*01	91.7	KVNsdgsHSKGD	BBBAAEEBBBBB	-1
L2-12-*	5IHZB	1.64	lambda	Homo.sapiens	Hu_IGLV4-69*01	97.1	Hu_IGLV4-69*01	91.7	KVNsdgsHSKGD	BBBBALBBAEBB	-1
L2-12-*	5IG7K	1.97	lambda	Homo.sapiens	Hu_IGLV4-69*01	97.1	Hu_IGLV4-69*01	91.7	KVNsdgsHSKGD	BBBAAEEBBBBB	-1
L2-12-*	3S96B	1.9	lambda	Mus.musculus	Hu_IGLV4-69*01	77.9	Hu_IGLV4-69*01	66.7	ELKKdgshSTGD	BBBAALBBBBEe	-1
L2-12-*	7FGKL	2.3	lambda	Mus.musculus	Hu_IGLV4-69*01	77.9	Hu_IGLV4-69*01	66.7	ELKKdgshSTGD	BBBAALBBBBBB	-1
L2-12-*	6IEAL	2	lambda	Homo.sapiens	Hu_IGLV5-37*01	100.0	Hu_IGLV5-37*01	100.0	YYysdsDKGQGS	BBABAABBBBBB	-1
L2-12-*	6IEKC	2.7	lambda	Homo.sapiens	Hu_IGLV5-37*01	97.1	Hu_IGLV5-37*01	100.0	YYysdsDKGQGS	BBABAABBBBBB	-1
L2-12-*	6IEKF	2.7	lambda	Homo.sapiens	Hu_IGLV5-37*01	97.1	Hu_IGLV5-37*01	100.0	YYysdsDKGQGS	BBABAABBBBBB	-1
L2-12-*	7C80L	EM	kappa	Mus.musculus	Mo_IGKV5-43*01	88.4	CDRLenMismatch	-1.0	KTASAEKaksiS	BBBaABLBBBBA	-1

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022