PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDR Structures for H2-12-*

Structures in cluster H2-12-*
Cluster	PDB	Resolution	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	Sequence	Ramachandran	Distance(°)
H2-12-*	6S8DY	EM	heavy	Homo.sapiens	Hu_IGHV3-15*07	98.6	Hu_IGHV3-15*07	75.0	RIKSraDGGPTD	BBBBAAALBBBB	-1
H2-12-*	6S8DH	EM	heavy	Homo.sapiens	Hu_IGHV3-15*07	98.6	Hu_IGHV3-15*07	75.0	RIKSraDGGPTD	BBBBAAALBBBB	-1
H2-12-*	6S8DP	EM	heavy	Homo.sapiens	Hu_IGHV3-15*07	98.6	Hu_IGHV3-15*07	75.0	RIKSraDGGPTD	BBBBAAALBBBB	-1
H2-12-*	3LZFH	2.8	heavy	Homo.sapiens	Hu_IGHV2-70*01	93.2	CDRLenMismatch	-1.0	LIDWDDDTyyIT	BBBAAALBBBBB	-1
H2-12-*	3QHZH	1.55	heavy	Homo.sapiens	Hu_IGHV2-70*01	95.9	CDRLenMismatch	-1.0	LIDWDDDTyyIT	BBBAABABBBBB	-1
H2-12-*	3QHZI	1.55	heavy	Homo.sapiens	Hu_IGHV2-70*01	95.9	CDRLenMismatch	-1.0	LIDWDDDTyyIT	BBBAABABBBBB	-1
H2-12-*	6MNRH	2.201	heavy	Macaca.mulatta	Ma_IGHV3-18*01	91.8	Ma_IGHV3-18*01	91.7	FIKTKadGGTAA	BBBBAABALBBB	-1
H2-12-*	6MNSA	2.7	heavy	Macaca.mulatta	Ma_IGHV3-18*01	91.8	Ma_IGHV3-18*01	91.7	FIKTKadGGTAA	BBBBAABALBBB	-1
H2-12-*	6MNSH	2.7	heavy	Macaca.mulatta	Ma_IGHV3-18*01	91.8	Ma_IGHV3-18*01	91.7	FIKTKadGGTAA	BBBBAABALBBB	-1
H2-12-*	5FXCH	2.05	heavy	Mus.musculus	Mo_IGHV6-6*02	95.9	Mo_IGHV6-6*02	100.0	EIRlkSNNYATH		-1
H2-12-*	5GHWH	2.4	heavy	Homo.sapiens	Hu_IGHV3-15*07	80.8	Hu_IGHV3-15*07	33.3	RITGpgEGWSVD	BBBBBLALLBBB	-1
H2-12-*	5JR1H	1.601	heavy	Homo.sapiens	Hu_IGHV3-15*01	100.0	Hu_IGHV3-15*01	100.0	RIKSKtdGGTTD	BBBBAABALBBB	-1
H2-12-*	7MFAU	2.4	heavy	Homo.sapiens	Hu_IGHV3-15*07	82.2	Hu_IGHV3-15*07	33.3	RITGpgEGWSVD	BBBBAAALLBBA	-1
H2-12-*	5C7XH	2.95	heavy	Homo.sapiens	Hu_IGHV3-66*01	97.3	CDRLenMismatch	-1.0	GIENKyaGGATY	BBBBAAALLBBB	-1
H2-12-*	7KR5O	EM	heavy	Mus.musculus	Mo_IGHV10-3*01	100.0	Mo_IGHV10-3*01	83.3	RIRTksnNYATY		-1
H2-12-*	7KR5H	EM	heavy	Mus.musculus	Mo_IGHV10-3*01	100.0	Mo_IGHV10-3*01	83.3	RIRTksnNYATY		-1
H2-12-*	7KR5M	EM	heavy	Mus.musculus	Mo_IGHV10-3*01	100.0	Mo_IGHV10-3*01	83.3	RIRTksnNYATY		-1
H2-12-*	1MCPH	2.7	heavy	Mus.musculus	Mo_IGHV7-1*02	100.0	Mo_IGHV7-1*02	83.3	ASRNKgnKYTTE	BBBBBAAEBBBB	-1
H2-12-*	2MCPH	3.1	heavy	Mus.musculus	Mo_IGHV7-1*02	100.0	Mo_IGHV7-1*02	83.3	ASRNKgnKYTTE	BBBBBABEBBBB	-1
H2-12-*	7M7EC	EM	heavy	Homo.sapiens	Hu_IGHV3-49*04	98.6	Hu_IGHV3-49*04	100.0	FIRSKayGGTTE	BBBBBLAEABBB	-1
H2-12-*	7M7FE	EM	heavy	Homo.sapiens	Hu_IGHV3-49*04	98.6	Hu_IGHV3-49*04	100.0	FIRSKayGGTTE	BBBBAAAEEBBB	-1
H2-12-*	7M7HC	EM	heavy	Homo.sapiens	Hu_IGHV3-49*04	98.6	Hu_IGHV3-49*04	100.0	FIRSKayGGTTE	BBBBAAAEEBBB	-1
H2-12-*	7M7GE	EM	heavy	Homo.sapiens	Hu_IGHV3-49*04	98.6	Hu_IGHV3-49*04	100.0	FIRSKayGGTTE	BBBBAAAEEBBB	-1
H2-12-*	7M7HE	EM	heavy	Homo.sapiens	Hu_IGHV3-49*04	98.6	Hu_IGHV3-49*04	100.0	FIRSKayGGTTE	BBBBAAAEEBBB	-1
H2-12-*	7M7JC	EM	heavy	Homo.sapiens	Hu_IGHV3-49*04	98.6	Hu_IGHV3-49*04	100.0	FIRSKayGGTTE	BBBBAAAEEBBB	-1
H2-12-*	7M7JE	EM	heavy	Homo.sapiens	Hu_IGHV3-49*04	98.6	Hu_IGHV3-49*04	100.0	FIRSKayGGTTE	BBBBAAAEEBBB	-1
H2-12-*	3C5SB	2	heavy	Mus.musculus	Mo_IGHV6-3*03	91.8	Mo_IGHV6-3*03	83.3	EIRlksdnyaTY		-1
H2-12-*	6E4YH	2.24	heavy	Mus.musculus	Mo_IGHV6-3*01	100.0	Mo_IGHV6-3*01	100.0	QIRlkSDNYATH		-1
H2-12-*	6MV5H	2.1	heavy	Mus.musculus	Mo_IGHV6-3*01	100.0	Mo_IGHV6-3*01	100.0	QIRlkSDNYATH		-1
H2-12-*	5NBIH	2.1	heavy	Synthetic.construct	Mo_IGHV6-3*03	84.9	Mo_IGHV6-3*03	58.3	EIRNKSdgYTTY	BBBAEABLLBBB	-1
H2-12-*	1AIFH	2.9	heavy	Mus.musculus	Mo_IGHV6-3*03	91.8	Mo_IGHV6-3*03	75.0	EIRLNsdNFATH	EBBAALBABBBB	-1
H2-12-*	1AIFB	2.9	heavy	Mus.musculus	Mo_IGHV6-3*03	91.8	Mo_IGHV6-3*03	75.0	EIRLNsdNFATH	EBBAALBABBBB	-1
H2-12-*	1IAII	2.9	heavy	Mus.musculus	Mo_IGHV6-3*03	91.8	Mo_IGHV6-3*03	75.0	EIRLNsdNFATH	BBBBBBLEBBBB	-1
H2-12-*	3IY5B	EM	heavy	Mus.musculus	Mo_IGHV6-3*03	91.8	Mo_IGHV6-3*03	75.0	EIRLNsdNFATH	EBBAALBABBBB	-1
H2-12-*	6M3CK	3.7	heavy	Homo.sapiens	Hu_IGHV3-72*01	98.6	Hu_IGHV3-72*01	33.3	DIRlkSNNYEKH	BBBBAAALLBBA	-1
H2-12-*	6M3CH	3.7	heavy	Homo.sapiens	Hu_IGHV3-72*01	98.6	Hu_IGHV3-72*01	33.3	DIRlkSNNYEKH	BBBBAAALLBBA	-1
H2-12-*	6M3CF	3.7	heavy	Homo.sapiens	Hu_IGHV3-72*01	98.6	Hu_IGHV3-72*01	33.3	DIRlkSNNYEKH	BBBBAAALLBBA	-1
H2-12-*	3IXXG	EM	heavy	Mus.musculus	Mo_IGHV7-3*02	94.5	Mo_IGHV7-3*02	83.3	FIGNKanDYTTE		-1
H2-12-*	3IXXI	EM	heavy	Mus.musculus	Mo_IGHV7-3*02	94.5	Mo_IGHV7-3*02	83.3	FIGNKanDYTTE		-1
H2-12-*	3IXYG	EM	heavy	Mus.musculus	Mo_IGHV7-3*02	94.5	Mo_IGHV7-3*02	83.3	FIGNKanDYTTE		-1
H2-12-*	3IXYI	EM	heavy	Mus.musculus	Mo_IGHV7-3*02	94.5	Mo_IGHV7-3*02	83.3	FIGNKanDYTTE		-1
H2-12-*	7EY5H	EM	heavy	Homo.sapiens	Hu_IGHV3-15*07	87.7	Hu_IGHV3-15*07	83.3	RIKSKadGQTTD	BBBALAALLBBB	-1
H2-12-*	1MAMH	2.45	heavy	Mus.musculus	Mo_IGHV7-3*02	100.0	Mo_IGHV7-3*02	91.7	FIRNKadGYTTE	BBBBBAAEBBBB	-1
H2-12-*	2AEQH	3	heavy	Mus.musculus	Mo_IGHV7-3*02	91.8	Mo_IGHV7-3*02	75.0	LIRNKGNgyTME	BBBBABLBLBBB	-1
H2-12-*	4G3YH	2.6	heavy	Homo.sapiens	Mo_IGHV6-6*02	93.2	Mo_IGHV6-6*02	75.0	EIRSKsiNSATH	BBBBAAAEALBB	-1
H2-12-*	4X80H	2.6	heavy	Mus.musculus	Mo_IGHV6-6*01	97.3	Mo_IGHV6-6*01	83.3	EIRNKanNHARH	BBBBBaABBABB	-1
H2-12-*	4X8JH	2.35	heavy	Mus.musculus	Mo_IGHV6-6*01	94.5	Mo_IGHV6-6*01	66.7	EIRhkandhaif		-1
H2-12-*	4X8JA	2.35	heavy	Mus.musculus	Mo_IGHV6-6*01	94.5	Mo_IGHV6-6*01	66.7	EIrhkandhaif		-1
H2-12-*	6OUSS	3.4	heavy	Homo.sapiens	Hu_IGHV3-49*04	94.5	Hu_IGHV3-49*04	75.0	FIKSKtyGGTKE	BBBBABLLLBBB	-1
H2-12-*	6OUSW	3.4	heavy	Homo.sapiens	Hu_IGHV3-49*04	94.5	Hu_IGHV3-49*04	75.0	FIKSKtyGGTKE	BBBBAAAELBBB	-1
H2-12-*	6OUSU	3.4	heavy	Homo.sapiens	Hu_IGHV3-49*04	94.5	Hu_IGHV3-49*04	75.0	FIKSKtyGGTKE	BBBBABLBLBBB	-1
H2-12-*	6OUSQ	3.4	heavy	Homo.sapiens	Hu_IGHV3-49*04	94.5	Hu_IGHV3-49*04	75.0	FIKSKtyGGTKE	BBBBAABEABBB	-1
H2-12-*	6X5EH	2.29	heavy	Mus.musculus	Mo_IGHV6-6*01	97.3	Mo_IGHV6-6*01	58.3	EIRSKviNPAIY	BBBBLBABALBB	-1
H2-12-*	6X5EB	2.29	heavy	Mus.musculus	Mo_IGHV6-6*01	97.3	Mo_IGHV6-6*01	58.3	EIRSKviNPAIY	BBBBAABAALBB	-1
H2-12-*	7CVYS	EM	heavy	Mus.musculus	Mo_IGHV6-3*01	91.5	Mo_IGHV6-3*01	83.3	QIRlkSDSYATY		-1
H2-12-*	7CVYN	EM	heavy	Mus.musculus	Mo_IGHV6-3*01	91.5	Mo_IGHV6-3*01	83.3	QIRlkSDSYATY		-1
H2-12-*	7CVYI	EM	heavy	Mus.musculus	Mo_IGHV6-3*01	91.5	Mo_IGHV6-3*01	83.3	QIRlkSDSYATY		-1
H2-12-*	7CVYD	EM	heavy	Mus.musculus	Mo_IGHV6-3*01	91.5	Mo_IGHV6-3*01	83.3	QIRlkSDSYATY		-1
H2-12-*	7DKJK	EM	heavy	Mus.musculus	Mo_IGHV7-3*02	97.3	Mo_IGHV7-3*02	83.3	FIRDraNGYTTE	BBBBAAAEBBBB	-1
H2-12-*	7DKJC	EM	heavy	Mus.musculus	Mo_IGHV7-3*02	97.3	Mo_IGHV7-3*02	83.3	FIRDraNGYTTE	BBBBAAAEBBBB	-1
H2-12-*	7DKJG	EM	heavy	Mus.musculus	Mo_IGHV7-3*02	97.3	Mo_IGHV7-3*02	83.3	FIRDraNGYTTE	BBBBAAAEBBBB	-1
H2-12-*	7E7EC	3.8	heavy	Homo.sapiens	Hu_IGHV3-66*01	95.9	Ra_IGHV7-7*01	91.7	FIRnkandYTTE		-1
H2-12-*	7E7EH	3.8	heavy	Homo.sapiens	Hu_IGHV3-66*01	95.9	Ra_IGHV7-7*01	91.7	FIRnkandYTTE		-1
H2-12-*	7KBAA	2.8	heavy	Homo.sapiens	Hu_IGHV3-72*01	79.5	Hu_IGHV3-72*01	66.7	RSRNKdySSTTE	BBBBLABABABB	-1
H2-12-*	7KBBA	EM	heavy	Homo.sapiens	Hu_IGHV3-72*01	80.8	Hu_IGHV3-72*01	66.7	RSRNKdySSTTE	BBBBLABABABB	-1
H2-12-*	7KBAH	2.8	heavy	Homo.sapiens	Hu_IGHV3-72*01	79.5	Hu_IGHV3-72*01	66.7	RSRNKdySSTTE	BBBBAABABABB	-1
H2-12-*	7KZBH	2.83	heavy	Homo.sapiens	Hu_IGHV3-72*01	100.0	Hu_IGHV3-72*01	100.0	RTRNKanSYTTE	BBBBAABEABBB	-1
H2-12-*	5FEHF	3.1	heavy	Homo.sapiens	Hu_IGHV3-15*07	95.9	Hu_IGHV3-15*07	25.0	HMRPtpEGGAKD	BBBBAAAELBBB	-1
H2-12-*	5FEHB	3.1	heavy	Homo.sapiens	Hu_IGHV3-15*07	95.9	Hu_IGHV3-15*07	25.0	Hmrptpeggakd		-1
H2-12-*	5FEHD	3.1	heavy	Homo.sapiens	Hu_IGHV3-15*07	95.9	Hu_IGHV3-15*07	25.0	HMRptpeggakD		-1
H2-12-*	1AD0B	2.5	heavy	Homo.sapiens	Hu_IGHV3-72*01	84.9	Hu_IGHV3-72*01	66.7	FIGNkaNGYTTE	BBBBBAALLBBB	-1
H2-12-*	7QU2A	2.5	heavy	Mus.musculus	Mo_IGHV13-2*01	97.2	Mo_IGHV13-2*01	100.0	VITVKSDNygAN	BBBBAABALBBB	-1
H2-12-*	4HXAH	2.06	heavy	Mus.musculus	Mo_IGHV13-2*02	98.6	Mo_IGHV13-2*02	91.7	VITVKSDiyGAN	BBBBAAALAEBB	-1
H2-12-*	1BEYH	3.25	heavy	Homo.sapiens	Hu_IGHV4-59*04	89.0	Ra_IGHV7-7*01	83.3	FIRDKakGYTTE	BBBBAAAEBBBB	-1
H2-12-*	6MAMA	4.1	heavy	Homo.sapiens	Hu_IGHV3-15*01	97.3	Hu_IGHV3-15*01	91.7	RIKSKtdGGTID	BBBBAABALBBB	-1
H2-12-*	5U3MH	2.418	heavy	Homo.sapiens	Hu_IGHV3-15*04	86.3	Hu_IGHV3-15*04	41.7	RISRVGDgpIID	BBBBAAAEbBBB	-1
H2-12-*	5U3NH	2	heavy	Homo.sapiens	Hu_IGHV3-15*04	84.9	Hu_IGHV3-15*04	41.7	RISRVGDgpIID	BBBBAAAEbBBB	-1

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022