PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 5CP7

#CDRs = 6; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Mus.musculus	Mo_IGKV1-135*01	94.2	Mo_IGKV1-135*01	100	L1	16	L1-16-1	9	KSSQSLLDSDGKTYLN	BPABPAPPAALPPPBB
A	kappa	Mus.musculus	Mo_IGKV1-135*01	94.2	Mo_IGKV1-135*01	100	L2	8	L2-8-5	37	YLVSKLDS	DBADPPPA
A	kappa	Mus.musculus	Mo_IGKV1-135*01	94.2	Mo_IGKV	-1	L3	9	L3-9-cis7-1	11	WQGTHFPQT	BBDABPpPB
B	heavy	Mus.musculus	Mo_IGHV3-1*02	93.2	Mo_IGHV3-1*02	100	H1	14	H1-14-1	31	TVTGYSITSGYSWH	PBBLBPAADDBPBB
B	heavy	Mus.musculus	Mo_IGHV3-1*02	93.2	Mo_IGHV3-1*02	100	H2	9	H2-9-1	10	YIHYSGSTN	BBPAALPBB
B	heavy	Mus.musculus	Mo_IGHV3-1*02	93.2	Mo_IGHV	-1	H3	6	H3-6-*	-1	ARYGGY	BPAALB
C	kappa	Mus.musculus	Mo_IGKV1-135*01	94.2	Mo_IGKV1-135*01	100	L1	16	L1-16-1	11	KSSQSLLDSDGKTYLN	PBABPAPPAALPBPBB
C	kappa	Mus.musculus	Mo_IGKV1-135*01	94.2	Mo_IGKV1-135*01	100	L2	8	L2-8-*	-1	YLVSKLDS	DBADPPPA
C	kappa	Mus.musculus	Mo_IGKV1-135*01	94.2	Mo_IGKV	-1	L3	9	L3-9-cis7-1	9	WQGTHFPQT	BBDABPpPB
D	heavy	Mus.musculus	Mo_IGHV3-1*02	93.2	Mo_IGHV3-1*02	100	H1	14	H1-14-1	32	TVTGYSITSGYSWH	PPBLBPAAADPPBB
D	heavy	Mus.musculus	Mo_IGHV3-1*02	93.2	Mo_IGHV3-1*02	100	H2	9	H2-9-1	13	YIHYSGSTN	BBPAALPBB
D	heavy	Mus.musculus	Mo_IGHV3-1*02	93.2	Mo_IGHV	-1	H3	6	H3-6-*	-1	ARYGGY	BPAALP
E	kappa	Mus.musculus	Mo_IGKV1-135*01	94.2	Mo_IGKV1-135*01	100	L1	16	L1-16-1	13	KSSQSLLDSDGKTYLN	BPABPAPPAALPBPBB
E	kappa	Mus.musculus	Mo_IGKV1-135*01	94.2	Mo_IGKV1-135*01	100	L2	8	L2-8-*	-1	YLVSKLDS	DPADPBPA
E	kappa	Mus.musculus	Mo_IGKV1-135*01	94.2	Mo_IGKV	-1	L3	9	L3-9-cis7-3	24	WQGTHFPQT	BBDABPbLB
F	heavy	Mus.musculus	Mo_IGHV3-1*02	93.2	Mo_IGHV3-1*02	100	H1	14	H1-14-1	34	TVTGYSITSGYSWH	PPBLBPAADDBPBB
F	heavy	Mus.musculus	Mo_IGHV3-1*02	93.2	Mo_IGHV3-1*02	100	H2	9	H2-9-1	19	YIHYSGSTN	BBPADLPBB
F	heavy	Mus.musculus	Mo_IGHV3-1*02	93.2	Mo_IGHV	-1	H3	6	H3-6-*	-1	ARYGGY	BPAALP
G	kappa	Mus.musculus	Mo_IGKV1-135*01	94.2	Mo_IGKV1-135*01	100	L1	16	L1-16-1	15	KSSQSLLDSDGKTYLN	BPABPAPPAALBBPBB
G	kappa	Mus.musculus	Mo_IGKV1-135*01	94.2	Mo_IGKV1-135*01	100	L2	8	L2-8-*	-1	YLVSKLDS	DBGDBPPA
G	kappa	Mus.musculus	Mo_IGKV1-135*01	94.2	Mo_IGKV	-1	L3	9	L3-9-cis7-1	13	WQGTHFPQT	BBDABPpPB
H	heavy	Mus.musculus	Mo_IGHV3-1*02	93.2	Mo_IGHV3-1*02	100	H1	14	H1-14-1	30	TVTGYSITSGYSWH	BPBLBPAADBBPBP
H	heavy	Mus.musculus	Mo_IGHV3-1*02	93.2	Mo_IGHV3-1*02	100	H2	9	H2-9-1	7	YIHYSGSTN	BBPAALPBB
H	heavy	Mus.musculus	Mo_IGHV3-1*02	93.2	Mo_IGHV	-1	H3	6	H3-6-*	-1	ARYGGY	BBAALB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019