PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 6NC3

#CDRs = 6; #Clusters = 6.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV1-2*03	78.6	Hu_IGHV1-2*03	61.5	H1	13	H1-13-1	23	RAFGYTFTGNALH	PPPLBPAAABPBB
H	heavy	Homo.sapiens	Hu_IGHV1-2*03	78.6	Hu_IGHV1-2*03	70	H2	10	H2-10-1	12	WINPHSGDTT	BBPAAALPBB
H	heavy	Homo.sapiens	Hu_IGHV1-2*03	78.6	Hu_IGHV	-1	H3	15	H3-15-*	-1	ARDKYYGNEAVGMDV	BBBALPLLBPDBBDB
L	kappa	Homo.sapiens	Hu_IGKV1-9*01	89.7	Hu_IGKV1-9*01	63.6	L1	11	L1-11-1	23	RASQGVRNELA	BBAPPDGDPBB
L	kappa	Homo.sapiens	Hu_IGKV1-9*01	89.7	Hu_IGKV1-9*01	87.5	L2	8	L2-8-1	18	YYASTLQS	BLLDPPPP
L	kappa	Homo.sapiens	Hu_IGKV1-9*01	89.7	Hu_IGKV	-1	L3	9	L3-9-cis7-1	31	QHMSSYPLT	BBDABBpPP
O	heavy	Homo.sapiens	Hu_IGHV1-2*03	78.6	Hu_IGHV1-2*03	61.5	H1	13	H1-13-1	23	RAFGYTFTGNALH	PPPLBPAAABPBB
O	heavy	Homo.sapiens	Hu_IGHV1-2*03	78.6	Hu_IGHV1-2*03	70	H2	10	H2-10-1	12	WINPHSGDTT	BBPAAALPBB
O	heavy	Homo.sapiens	Hu_IGHV1-2*03	78.6	Hu_IGHV	-1	H3	15	H3-15-*	-1	ARDKYYGNEAVGMDV	BBBALPLLBPDBBDB
P	heavy	Homo.sapiens	Hu_IGHV1-2*03	78.6	Hu_IGHV1-2*03	61.5	H1	13	H1-13-1	23	RAFGYTFTGNALH	PPPLBPAAABPBB
P	heavy	Homo.sapiens	Hu_IGHV1-2*03	78.6	Hu_IGHV1-2*03	70	H2	10	H2-10-1	12	WINPHSGDTT	BBPAAALPBB
P	heavy	Homo.sapiens	Hu_IGHV1-2*03	78.6	Hu_IGHV	-1	H3	15	H3-15-*	-1	ARDKYYGNEAVGMDV	BBBALPLLBPDBBDB
Q	heavy	Homo.sapiens	Hu_IGHV1-2*03	78.6	Hu_IGHV1-2*03	61.5	H1	13	H1-13-1	23	RAFGYTFTGNALH	PPPLBPAAABPBB
Q	heavy	Homo.sapiens	Hu_IGHV1-2*03	78.6	Hu_IGHV1-2*03	70	H2	10	H2-10-1	12	WINPHSGDTT	BBPAAALPBB
Q	heavy	Homo.sapiens	Hu_IGHV1-2*03	78.6	Hu_IGHV	-1	H3	15	H3-15-*	-1	ARDKYYGNEAVGMDV	BBBALPLLBPDBBDB
R	heavy	Homo.sapiens	Hu_IGHV1-2*03	78.6	Hu_IGHV1-2*03	61.5	H1	13	H1-13-1	23	RAFGYTFTGNALH	PPPLBPAAABPBB
R	heavy	Homo.sapiens	Hu_IGHV1-2*03	78.6	Hu_IGHV1-2*03	70	H2	10	H2-10-1	12	WINPHSGDTT	BBPAAALPBB
R	heavy	Homo.sapiens	Hu_IGHV1-2*03	78.6	Hu_IGHV	-1	H3	15	H3-15-*	-1	ARDKYYGNEAVGMDV	BBBALPLLBPDBBDB
S	heavy	Homo.sapiens	Hu_IGHV1-2*03	78.6	Hu_IGHV1-2*03	61.5	H1	13	H1-13-1	23	RAFGYTFTGNALH	PPPLBPAAABPBB
S	heavy	Homo.sapiens	Hu_IGHV1-2*03	78.6	Hu_IGHV1-2*03	70	H2	10	H2-10-1	12	WINPHSGDTT	BBPAAALPBB
S	heavy	Homo.sapiens	Hu_IGHV1-2*03	78.6	Hu_IGHV	-1	H3	15	H3-15-*	-1	ARDKYYGNEAVGMDV	BBBALPLLBPDBBDB
T	kappa	Homo.sapiens	Hu_IGKV1-9*01	89.7	Hu_IGKV1-9*01	63.6	L1	11	L1-11-1	23	RASQGVRNELA	BBAPPDGDPBB
T	kappa	Homo.sapiens	Hu_IGKV1-9*01	89.7	Hu_IGKV1-9*01	87.5	L2	8	L2-8-1	18	YYASTLQS	BLLDPPPP
T	kappa	Homo.sapiens	Hu_IGKV1-9*01	89.7	Hu_IGKV	-1	L3	9	L3-9-cis7-1	31	QHMSSYPLT	BBDABBpPP
U	kappa	Homo.sapiens	Hu_IGKV1-9*01	89.7	Hu_IGKV1-9*01	63.6	L1	11	L1-11-1	23	RASQGVRNELA	BBAPPDGDPBB
U	kappa	Homo.sapiens	Hu_IGKV1-9*01	89.7	Hu_IGKV1-9*01	87.5	L2	8	L2-8-1	18	YYASTLQS	BLLDPPPP
U	kappa	Homo.sapiens	Hu_IGKV1-9*01	89.7	Hu_IGKV	-1	L3	9	L3-9-cis7-1	31	QHMSSYPLT	BBDABBpPP
V	kappa	Homo.sapiens	Hu_IGKV1-9*01	89.7	Hu_IGKV1-9*01	63.6	L1	11	L1-11-1	23	RASQGVRNELA	BBAPPDGDPBB
V	kappa	Homo.sapiens	Hu_IGKV1-9*01	89.7	Hu_IGKV1-9*01	87.5	L2	8	L2-8-1	18	YYASTLQS	BLLDPPPP
V	kappa	Homo.sapiens	Hu_IGKV1-9*01	89.7	Hu_IGKV	-1	L3	9	L3-9-cis7-1	31	QHMSSYPLT	BBDABBpPP
W	kappa	Homo.sapiens	Hu_IGKV1-9*01	89.7	Hu_IGKV1-9*01	63.6	L1	11	L1-11-1	23	RASQGVRNELA	BBAPPDGDPBB
W	kappa	Homo.sapiens	Hu_IGKV1-9*01	89.7	Hu_IGKV1-9*01	87.5	L2	8	L2-8-1	18	YYASTLQS	BLLDPPPP
W	kappa	Homo.sapiens	Hu_IGKV1-9*01	89.7	Hu_IGKV	-1	L3	9	L3-9-cis7-1	31	QHMSSYPLT	BBDABBpPP
X	kappa	Homo.sapiens	Hu_IGKV1-9*01	89.7	Hu_IGKV1-9*01	63.6	L1	11	L1-11-1	23	RASQGVRNELA	BBAPPDGDPBB
X	kappa	Homo.sapiens	Hu_IGKV1-9*01	89.7	Hu_IGKV1-9*01	87.5	L2	8	L2-8-1	18	YYASTLQS	BLLDPPPP
X	kappa	Homo.sapiens	Hu_IGKV1-9*01	89.7	Hu_IGKV	-1	L3	9	L3-9-cis7-1	31	QHMSSYPLT	BBDABBpPP

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019