PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 6E5P

#CDRs = 6; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
1	kappa	Homo.sapiens	Hu_IGKV1-5*01	89.7	Hu_IGKV1-5*01	81.8	L1	11	L1-11-1	28	RASQSIETWLA	BPABPDGDAPB
1	kappa	Homo.sapiens	Hu_IGKV1-5*01	89.7	Hu_IGKV1-5*01	50	L2	8	L2-8-1	17	YKASTLKT	BLLDPPPP
1	kappa	Homo.sapiens	Hu_IGKV1-5*01	89.7	Hu_IGKV	-1	L3	9	L3-9-*	-1	QHYAGYSAT	BPPPDDBBB
2	heavy	Homo.sapiens	Hu_IGHV3-21*01	74	Hu_IGHV3-21*01	38.5	H1	13	H1-13-1	32	GVSNFRISAHTMN	BBBLBPAAAPBBB
2	heavy	Homo.sapiens	Hu_IGHV3-21*01	74	Hu_IGHV3-21*01	60	H2	10	H2-10-4	29	SISTSSTYRD	BBPPLLABPB
2	heavy	Homo.sapiens	Hu_IGHV3-21*01	74	Hu_IGHV	-1	H3	16	H3-16-*	-1	ARKGSDRLSDNDPFDA	BPDBPGABGDBPBPAB
3	heavy	Homo.sapiens	Hu_IGHV3-21*01	74	Hu_IGHV3-21*01	38.5	H1	13	H1-13-1	29	GVSNFRISAHTMN	BBBLBPAAABPBB
3	heavy	Homo.sapiens	Hu_IGHV3-21*01	74	Hu_IGHV3-21*01	60	H2	10	H2-10-4	21	SISTSSTYRD	BBPPLLABBB
3	heavy	Homo.sapiens	Hu_IGHV3-21*01	74	Hu_IGHV	-1	H3	16	H3-16-*	-1	ARKGSDRLSDNDPFDA	BPDPBAPPBABPBPAB
4	kappa	Homo.sapiens	Hu_IGKV1-5*01	89.7	Hu_IGKV1-5*01	81.8	L1	11	L1-11-1	23	RASQSIETWLA	BPGBPDGDPBB
4	kappa	Homo.sapiens	Hu_IGKV1-5*01	89.7	Hu_IGKV1-5*01	50	L2	8	L2-8-1	15	YKASTLKT	BLLDPPPP
4	kappa	Homo.sapiens	Hu_IGKV1-5*01	89.7	Hu_IGKV	-1	L3	9	L3-9-*	-1	QHYAGYSAT	BPPDGDBBB
H	heavy	Homo.sapiens	Hu_IGHV3-21*01	74	Hu_IGHV3-21*01	38.5	H1	13	H1-13-1	29	GVSNFRISAHTMN	BBBLBPAAABPBB
H	heavy	Homo.sapiens	Hu_IGHV3-21*01	74	Hu_IGHV3-21*01	60	H2	10	H2-10-4	21	SISTSSTYRD	BBPPLLABBB
H	heavy	Homo.sapiens	Hu_IGHV3-21*01	74	Hu_IGHV	-1	H3	16	H3-16-*	-1	ARKGSDRLSDNDPFDA	BPDPBAPPBABPBPAB
I	heavy	Homo.sapiens	Hu_IGHV1-24*01	58.8	Mo_IGHV1-22*01	61.5	H1	13	H1-13-1	7	RASGYNFRDYSIH	PBBLBPAAABPBB
I	heavy	Homo.sapiens	Hu_IGHV1-24*01	58.8	Mo_IGHV1-22*01	40	H2	10	H2-10-1	9	WIKPLWGAVS	BBBAADLPBB
I	heavy	Homo.sapiens	Hu_IGHV1-24*01	58.8	Mo_IGHV	-1	H3	16	H3-16-*	-1	VRRGSCDYCGDFPWQY	BBPPDPAAPPAAPPAB
J	kappa	Homo.sapiens	Hu_IGKV3-20*01	77	Mo_IGKV4-55*01	30	L1	10	L1-10-*	-1	KASQGGNAMT	BPABPLPPBB
J	kappa	Homo.sapiens	Hu_IGKV3-20*01	77	Mo_IGKV4-55*01	75	L2	8	L2-8-1	7	YDTSRRAS	BLLDPPPP
J	kappa	Homo.sapiens	Hu_IGKV3-20*01	77	Mo_IGKV	-1	L3	5	L3-5-*	-1	QQFEF	BBGAB
K	kappa	Homo.sapiens	Hu_IGKV1-5*01	89.7	Hu_IGKV1-5*01	81.8	L1	11	L1-11-1	28	RASQSIETWLA	BPABPDGDAPB
K	kappa	Homo.sapiens	Hu_IGKV1-5*01	89.7	Hu_IGKV1-5*01	50	L2	8	L2-8-1	17	YKASTLKT	BLLDPPPP
K	kappa	Homo.sapiens	Hu_IGKV1-5*01	89.7	Hu_IGKV	-1	L3	9	L3-9-*	-1	QHYAGYSAT	BPPPDDBBB
L	kappa	Homo.sapiens	Hu_IGKV1-5*01	89.7	Hu_IGKV1-5*01	81.8	L1	11	L1-11-1	23	RASQSIETWLA	BPGBPDGDPBB
L	kappa	Homo.sapiens	Hu_IGKV1-5*01	89.7	Hu_IGKV1-5*01	50	L2	8	L2-8-1	15	YKASTLKT	BLLDPPPP
L	kappa	Homo.sapiens	Hu_IGKV1-5*01	89.7	Hu_IGKV	-1	L3	9	L3-9-*	-1	QHYAGYSAT	BPPDGDBBB
M	heavy	Homo.sapiens	Hu_IGHV3-21*01	74	Hu_IGHV3-21*01	38.5	H1	13	H1-13-1	33	GVSNFRISAHTMN	BBBLBPAAAPBBB
M	heavy	Homo.sapiens	Hu_IGHV3-21*01	74	Hu_IGHV3-21*01	60	H2	10	H2-10-4	29	SISTSSTYRD	BBPPLLABPB
M	heavy	Homo.sapiens	Hu_IGHV3-21*01	74	Hu_IGHV	-1	H3	16	H3-16-*	-1	ARKGSDRLSDNDPFDA	BPDBPGABGDBPBPAB
O	heavy	Homo.sapiens	Hu_IGHV1-24*01	58.8	Mo_IGHV1-22*01	61.5	H1	13	H1-13-1	7	RASGYNFRDYSIH	PBBLBPAAABPBB
O	heavy	Homo.sapiens	Hu_IGHV1-24*01	58.8	Mo_IGHV1-22*01	40	H2	10	H2-10-1	9	WIKPLWGAVS	BBBAADLPBB
O	heavy	Homo.sapiens	Hu_IGHV1-24*01	58.8	Mo_IGHV	-1	H3	16	H3-16-*	-1	VRRGSCDYCGDFPWQY	BBPPDPAAPPAAPPAB
P	kappa	Homo.sapiens	Hu_IGKV3-20*01	77	Mo_IGKV4-55*01	30	L1	10	L1-10-*	-1	KASQGGNAMT	BPABPLPPBB
P	kappa	Homo.sapiens	Hu_IGKV3-20*01	77	Mo_IGKV4-55*01	75	L2	8	L2-8-1	7	YDTSRRAS	BLLDPPPP
P	kappa	Homo.sapiens	Hu_IGKV3-20*01	77	Mo_IGKV	-1	L3	5	L3-5-*	-1	QQFEF	BBGAB
Q	kappa	Homo.sapiens	Hu_IGKV1-5*01	89.7	Hu_IGKV1-5*01	81.8	L1	11	L1-11-1	28	RASQSIETWLA	BPABPDGDAPB
Q	kappa	Homo.sapiens	Hu_IGKV1-5*01	89.7	Hu_IGKV1-5*01	50	L2	8	L2-8-1	17	YKASTLKT	BLLDPPPP
Q	kappa	Homo.sapiens	Hu_IGKV1-5*01	89.7	Hu_IGKV	-1	L3	9	L3-9-*	-1	QHYAGYSAT	BPPPDDBBB
R	heavy	Homo.sapiens	Hu_IGHV3-21*01	74	Hu_IGHV3-21*01	38.5	H1	13	H1-13-1	33	GVSNFRISAHTMN	BBBLBPAAAPBBB
R	heavy	Homo.sapiens	Hu_IGHV3-21*01	74	Hu_IGHV3-21*01	60	H2	10	H2-10-4	29	SISTSSTYRD	BBPPLLABPB
R	heavy	Homo.sapiens	Hu_IGHV3-21*01	74	Hu_IGHV	-1	H3	16	H3-16-*	-1	ARKGSDRLSDNDPFDA	BPDBPGABGDBPBPAB
S	heavy	Homo.sapiens	Hu_IGHV3-21*01	74	Hu_IGHV3-21*01	38.5	H1	13	H1-13-1	29	GVSNFRISAHTMN	BBBLBPAAABPBB
S	heavy	Homo.sapiens	Hu_IGHV3-21*01	74	Hu_IGHV3-21*01	60	H2	10	H2-10-4	21	SISTSSTYRD	BBPPLLABBB
S	heavy	Homo.sapiens	Hu_IGHV3-21*01	74	Hu_IGHV	-1	H3	16	H3-16-*	-1	ARKGSDRLSDNDPFDA	BPDPBAPPBABPBPAB
T	kappa	Homo.sapiens	Hu_IGKV1-5*01	89.7	Hu_IGKV1-5*01	81.8	L1	11	L1-11-1	23	RASQSIETWLA	BPGBPDGDPBB
T	kappa	Homo.sapiens	Hu_IGKV1-5*01	89.7	Hu_IGKV1-5*01	50	L2	8	L2-8-1	15	YKASTLKT	BLLDPPPP
T	kappa	Homo.sapiens	Hu_IGKV1-5*01	89.7	Hu_IGKV	-1	L3	9	L3-9-*	-1	QHYAGYSAT	BPPDGDBBB
V	heavy	Homo.sapiens	Hu_IGHV1-24*01	58.8	Mo_IGHV1-22*01	61.5	H1	13	H1-13-1	7	RASGYNFRDYSIH	PBBLBPAAABPBB
V	heavy	Homo.sapiens	Hu_IGHV1-24*01	58.8	Mo_IGHV1-22*01	40	H2	10	H2-10-1	9	WIKPLWGAVS	BBBAADLPBB
V	heavy	Homo.sapiens	Hu_IGHV1-24*01	58.8	Mo_IGHV	-1	H3	16	H3-16-*	-1	VRRGSCDYCGDFPWQY	BBPPDPAAPPAAPPAB
W	kappa	Homo.sapiens	Hu_IGKV3-20*01	77	Mo_IGKV4-55*01	30	L1	10	L1-10-*	-1	KASQGGNAMT	BPABPLPPBB
W	kappa	Homo.sapiens	Hu_IGKV3-20*01	77	Mo_IGKV4-55*01	75	L2	8	L2-8-1	7	YDTSRRAS	BLLDPPPP
W	kappa	Homo.sapiens	Hu_IGKV3-20*01	77	Mo_IGKV	-1	L3	5	L3-5-*	-1	QQFEF	BBGAB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019