PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 5VXJ

#CDRs = 3; #Clusters = 3.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	84.9	Al_IGHV3-3*01_VHH	61.5	H1	13	H1-13-1	10	AASGFTFSRAVMN	BBBLBPAAABPBB
B	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	84.9	Al_IGHV3-3*01_VHH	30	H2	10	H2-10-*	-1	RIYDAGGNGS	BBDPAABDGB
B	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	84.9	Al_IGHV	-1	H3	12	H3-12-*	-1	NAGIFDGNYRTY	BBBBBBGBBBBB
D	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	84.9	Al_IGHV3-3*01_VHH	61.5	H1	13	H1-13-1	9	AASGFTFSRAVMN	BBBLBPAAABPPB
D	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	84.9	Al_IGHV3-3*01_VHH	30	H2	10	H2-10-*	-1	RIYDAGGNGS	BBDPAABDGB
D	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	84.9	Al_IGHV	-1	H3	12	H3-12-*	-1	NAGIFDGNYRTY	BBBBBBABPBBB
F	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	84.9	Al_IGHV3-3*01_VHH	61.5	H1	13	H1-13-1	11	AASGFTFSRAVMN	BPBLBPAADBPPB
F	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	84.9	Al_IGHV3-3*01_VHH	30	H2	10	H2-10-*	-1	RIYDAGGNGS	BBDPAABDGB
F	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	84.9	Al_IGHV	-1	H3	12	H3-12-*	-1	NAGIFDGNYRTY	BBBBBBGBPBBB
H	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	84.9	Al_IGHV3-3*01_VHH	61.5	H1	13	H1-13-1	13	AASGFTFSRAVMN	BBBLBPAAABPPB
H	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	84.9	Al_IGHV3-3*01_VHH	30	H2	10	H2-10-*	-1	RIYDAGGNGS	BBDPAABDGB
H	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	84.9	Al_IGHV	-1	H3	12	H3-12-*	-1	NAGIFDGNYRTY	BBBBBBABPBBB
J	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	84.9	Al_IGHV3-3*01_VHH	61.5	H1	13	H1-13-1	11	AASGFTFSRAVMN	PBBLBPAAABPPB
J	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	84.9	Al_IGHV3-3*01_VHH	30	H2	10	H2-10-*	-1	RIYDAGGNGS	BBDPAAPDGB
J	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	84.9	Al_IGHV	-1	H3	12	H3-12-*	-1	NAGIFDGNYRTY	BBBBBBGBPBBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019