PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 5K9Q

#CDRs = 6; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
G	heavy	Homo.sapiens	Hu_IGHV1-18*01	94.5	Hu_IGHV1-18*01	76.9	H1	13	H1-13-1	16	KASGYSFSRYGIS	BBBLBPAAABBBB
G	heavy	Homo.sapiens	Hu_IGHV1-18*01	94.5	Hu_IGHV1-18*01	80	H2	10	H2-10-1	12	WISGYTGNTN	BBPAADLPBB
G	heavy	Homo.sapiens	Hu_IGHV1-18*01	94.5	Hu_IGHV	-1	H3	21	H3-21-cis21-*	-1	ARDKKQGEVVLPAASFRWFAP	BPBGPBLBPBPAADALPBPBp
H	heavy	Homo.sapiens	Hu_IGHV1-18*01	94.5	Hu_IGHV1-18*01	76.9	H1	13	H1-13-1	16	KASGYSFSRYGIS	BPBLBPAADBBBB
H	heavy	Homo.sapiens	Hu_IGHV1-18*01	94.5	Hu_IGHV1-18*01	80	H2	10	H2-10-1	13	WISGYTGNTN	BBPAADLPBB
H	heavy	Homo.sapiens	Hu_IGHV1-18*01	94.5	Hu_IGHV	-1	H3	21	H3-21-cis21-*	-1	ARDKKQGEVVLPAASFRWFAP	BPBGPBLBPBPAADALPBPBp
I	kappa	Homo.sapiens	Hu_IGKV1D-39*01	89.9	Hu_IGKV1D-39*01	72.7	L1	11	L1-11-1	7	RASQSIGKFLN	BBABPDGDPBB
I	kappa	Homo.sapiens	Hu_IGKV1D-39*01	89.9	Hu_IGKV1D-39*01	50	L2	8	L2-8-1	8	YYASNLET	BLGDPPPP
I	kappa	Homo.sapiens	Hu_IGKV1D-39*01	89.9	Hu_IGKV	-1	L3	9	L3-9-cis7-1	8	QQSNNVPHT	BBDABBpPB
J	heavy	Homo.sapiens	Hu_IGHV1-18*01	94.5	Hu_IGHV1-18*01	76.9	H1	13	H1-13-1	16	KASGYSFSRYGIS	BBBLBPAADBBBB
J	heavy	Homo.sapiens	Hu_IGHV1-18*01	94.5	Hu_IGHV1-18*01	80	H2	10	H2-10-1	39	WISGYTGNTN	BBPAABAPBB
J	heavy	Homo.sapiens	Hu_IGHV1-18*01	94.5	Hu_IGHV	-1	H3	21	H3-21-cis21-*	-1	ARDKKQGEVVLPAASFRWFAP	BPBGPBLBPBPAADALPBPBp
K	kappa	Homo.sapiens	Hu_IGKV1D-39*01	89.9	Hu_IGKV1D-39*01	72.7	L1	11	L1-11-1	9	RASQSIGKFLN	BBABPDGDPBB
K	kappa	Homo.sapiens	Hu_IGKV1D-39*01	89.9	Hu_IGKV1D-39*01	50	L2	8	L2-8-2	12	YYASNLET	BLLDBPPA
K	kappa	Homo.sapiens	Hu_IGKV1D-39*01	89.9	Hu_IGKV	-1	L3	9	L3-9-cis7-1	8	QQSNNVPHT	BPDABPpPB
L	kappa	Homo.sapiens	Hu_IGKV1D-39*01	89.9	Hu_IGKV1D-39*01	72.7	L1	11	L1-11-1	8	RASQSIGKFLN	BBABPDGDPBB
L	kappa	Homo.sapiens	Hu_IGKV1D-39*01	89.9	Hu_IGKV1D-39*01	50	L2	8	L2-8-2	13	YYASNLET	BLLDBPPA
L	kappa	Homo.sapiens	Hu_IGKV1D-39*01	89.9	Hu_IGKV	-1	L3	9	L3-9-cis7-1	6	QQSNNVPHT	BBDABPpPB
S	heavy	Homo.sapiens	Hu_IGHV1-18*01	94.5	Hu_IGHV1-18*01	76.9	H1	13	H1-13-1	17	KASGYSFSRYGIS	PPBLBPAAABBBB
S	heavy	Homo.sapiens	Hu_IGHV1-18*01	94.5	Hu_IGHV1-18*01	80	H2	10	H2-10-*	-1	WISGYTGNTN	BBPAAPAPBB
S	heavy	Homo.sapiens	Hu_IGHV1-18*01	94.5	Hu_IGHV	-1	H3	21	H3-21-cis21-*	-1	ARDKKQGEVVLPAASFRWFAP	BPBGPBLBPBPAADALPBPBp
T	kappa	Homo.sapiens	Hu_IGKV1D-39*01	89.9	Hu_IGKV1D-39*01	72.7	L1	11	L1-11-1	8	RASQSIGKFLN	BBABPDGDPBB
T	kappa	Homo.sapiens	Hu_IGKV1D-39*01	89.9	Hu_IGKV1D-39*01	50	L2	8	L2-8-1	10	YYASNLET	BLGDPPPP
T	kappa	Homo.sapiens	Hu_IGKV1D-39*01	89.9	Hu_IGKV	-1	L3	9	L3-9-cis7-1	7	QQSNNVPHT	BBDABPpPB
U	heavy	Homo.sapiens	Hu_IGHV1-18*01	94.5	Hu_IGHV1-18*01	76.9	H1	13	H1-13-1	17	KASGYSFSRYGIS	PPBLBPAAABBBB
U	heavy	Homo.sapiens	Hu_IGHV1-18*01	94.5	Hu_IGHV1-18*01	80	H2	10	H2-10-*	-1	WISGYTGNTN	BBPAAPAPBB
U	heavy	Homo.sapiens	Hu_IGHV1-18*01	94.5	Hu_IGHV	-1	H3	21	H3-21-cis21-*	-1	ARDKKQGEVVLPAASFRWFAP	BPBGPBLBPBPAADALPBPBp
V	kappa	Homo.sapiens	Hu_IGKV1D-39*01	89.9	Hu_IGKV1D-39*01	72.7	L1	11	L1-11-1	7	RASQSIGKFLN	BBABPDGDPBB
V	kappa	Homo.sapiens	Hu_IGKV1D-39*01	89.9	Hu_IGKV1D-39*01	50	L2	8	L2-8-1	12	YYASNLET	BLGDPPPP
V	kappa	Homo.sapiens	Hu_IGKV1D-39*01	89.9	Hu_IGKV	-1	L3	9	L3-9-cis7-1	7	QQSNNVPHT	BBDABPpPB
X	heavy	Homo.sapiens	Hu_IGHV1-18*01	94.5	Hu_IGHV1-18*01	76.9	H1	13	H1-13-1	15	KASGYSFSRYGIS	PPBLBPAADBBBB
X	heavy	Homo.sapiens	Hu_IGHV1-18*01	94.5	Hu_IGHV1-18*01	80	H2	10	H2-10-*	-1	WISGYTGNTN	BBPAAPAPBB
X	heavy	Homo.sapiens	Hu_IGHV1-18*01	94.5	Hu_IGHV	-1	H3	21	H3-21-cis21-*	-1	ARDKKQGEVVLPAASFRWFAP	BPBGPBLBPBPAADALPBPBp
Y	kappa	Homo.sapiens	Hu_IGKV1D-39*01	89.9	Hu_IGKV1D-39*01	72.7	L1	11	L1-11-1	8	RASQSIGKFLN	BBABPDGDPBB
Y	kappa	Homo.sapiens	Hu_IGKV1D-39*01	89.9	Hu_IGKV1D-39*01	50	L2	8	L2-8-1	10	YYASNLET	BLGDPPPP
Y	kappa	Homo.sapiens	Hu_IGKV1D-39*01	89.9	Hu_IGKV	-1	L3	9	L3-9-cis7-1	8	QQSNNVPHT	BBDABBpPB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019