PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 4ZYP

#CDRs = 6; #Clusters = 11.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
D	heavy	Homo.sapiens	Hu_IGHV3-30*01	91.8	Hu_IGHV3-30*01	84.6	H1	13	H1-13-1	9	AASGFSFSHYAMH	PBBLBPAADBPBB
D	heavy	Homo.sapiens	Hu_IGHV3-30*01	91.8	Hu_IGHV3-30*01	80	H2	10	H2-10-2	7	VISYDGENTY	BBPADLABBB
D	heavy	Homo.sapiens	Hu_IGHV3-30*01	91.8	Hu_IGHV	-1	H3	16	H3-16-*	-1	ARDRIVDDYYYYGMDV	BPPABPLBAPBBPBDB
E	kappa	Homo.sapiens	Hu_IGKV1D-33*01	89.9	Hu_IGKV1D-33*01	81.8	L1	11	L1-11-1	6	QASQDIKKYLN	BPABPDGDPBB
E	kappa	Homo.sapiens	Hu_IGKV1D-33*01	89.9	Hu_IGKV1D-33*01	87.5	L2	8	L2-8-1	8	HDASNLET	BLLDPPPP
E	kappa	Homo.sapiens	Hu_IGKV1D-33*01	89.9	Hu_IGKV	-1	L3	10	L3-10-cis8-*	-1	QQYDNLPPLT	BPDPGPPpPB
F	heavy	Homo.sapiens	Hu_IGHV3-30*01	91.8	Hu_IGHV3-30*01	84.6	H1	13	H1-13-1	9	AASGFSFSHYAMH	PBBLBPAADBPBB
F	heavy	Homo.sapiens	Hu_IGHV3-30*01	91.8	Hu_IGHV3-30*01	80	H2	10	H2-10-2	7	VISYDGENTY	BBPADLABBB
F	heavy	Homo.sapiens	Hu_IGHV3-30*01	91.8	Hu_IGHV	-1	H3	16	H3-16-*	-1	ARDRIVDDYYYYGMDV	BPPABPLBAPBBPBDB
G	kappa	Homo.sapiens	Hu_IGKV1D-33*01	89.9	Hu_IGKV1D-33*01	81.8	L1	11	L1-11-1	6	QASQDIKKYLN	BPABPDGDPBB
G	kappa	Homo.sapiens	Hu_IGKV1D-33*01	89.9	Hu_IGKV1D-33*01	87.5	L2	8	L2-8-1	8	HDASNLET	BLLDPPPP
G	kappa	Homo.sapiens	Hu_IGKV1D-33*01	89.9	Hu_IGKV	-1	L3	10	L3-10-cis8-*	-1	QQYDNLPPLT	BPDPGPPpPB
H	heavy	Homo.sapiens	Hu_IGHV3-30*01	91.8	Hu_IGHV3-30*01	84.6	H1	13	H1-13-1	8	AASGFSFSHYAMH	PBBLBPAADBPBB
H	heavy	Homo.sapiens	Hu_IGHV3-30*01	91.8	Hu_IGHV3-30*01	80	H2	10	H2-10-2	7	VISYDGENTY	BBPADLABBB
H	heavy	Homo.sapiens	Hu_IGHV3-30*01	91.8	Hu_IGHV	-1	H3	16	H3-16-*	-1	ARDRIVDDYYYYGMDV	BPPABBLBAPBBPBDB
I	kappa	Homo.sapiens	Hu_IGKV1D-33*01	89.9	Hu_IGKV1D-33*01	81.8	L1	11	L1-11-1	6	QASQDIKKYLN	BPABPDGDPBB
I	kappa	Homo.sapiens	Hu_IGKV1D-33*01	89.9	Hu_IGKV1D-33*01	87.5	L2	8	L2-8-1	8	HDASNLET	BLLDPPPP
I	kappa	Homo.sapiens	Hu_IGKV1D-33*01	89.9	Hu_IGKV	-1	L3	10	L3-10-cis8-*	-1	QQYDNLPPLT	BPDPGPPpPB
J	heavy	Mus.musculus	Hu_IGHV2-5*08	90.4	Mo_IGHV8-8*01	80	H1	15	H1-15-1	15	TFSGFSLSTAGMSVG	BBBLBPAAPPLPBBB
J	heavy	Mus.musculus	Hu_IGHV2-5*08	90.4	Mo_IGHV8-8*01	66.7	H2	9	H2-9-1	17	DIWWDDKKH	BBBAALPBB
J	heavy	Mus.musculus	Hu_IGHV2-5*08	90.4	Mo_IGHV	-1	H3	12	H3-12-*	-1	ARDMIFNFYFDV	BPBBAABPBPAB
K	heavy	Mus.musculus	Hu_IGHV2-5*08	90.4	Mo_IGHV8-8*01	80	H1	15	H1-15-1	12	TFSGFSLSTAGMSVG	BBBLBPAAPPLPBBB
K	heavy	Mus.musculus	Hu_IGHV2-5*08	90.4	Mo_IGHV8-8*01	66.7	H2	9	H2-9-1	17	DIWWDDKKH	BBBAALPBB
K	heavy	Mus.musculus	Hu_IGHV2-5*08	90.4	Mo_IGHV	-1	H3	12	H3-12-*	-1	ARDMIFNFYFDV	BPBBAABPBPAB
L	kappa	Mus.musculus	Hu_IGKV1-5*01	100	Mo_IGKV4-59*01	80	L1	10	L1-10-1	9	SASSRVGYMH	BBABPBABBB
L	kappa	Mus.musculus	Hu_IGKV1-5*01	100	Mo_IGKV4-59*01	100	L2	8	L2-8-1	9	YDTSKLAS	BLLDPPPP
L	kappa	Mus.musculus	Hu_IGKV1-5*01	100	Mo_IGKV	-1	L3	9	L3-9-cis7-1	14	FQGSGYPFT	BBDABPpPB
M	kappa	Mus.musculus	Hu_IGKV1-5*01	100	Mo_IGKV4-59*01	80	L1	10	L1-10-1	10	SASSRVGYMH	BPABPBABBB
M	kappa	Mus.musculus	Hu_IGKV1-5*01	100	Mo_IGKV4-59*01	100	L2	8	L2-8-1	10	YDTSKLAS	BLLDPPPP
M	kappa	Mus.musculus	Hu_IGKV1-5*01	100	Mo_IGKV	-1	L3	9	L3-9-cis7-1	11	FQGSGYPFT	BBDABPpPB
N	heavy	Mus.musculus	Hu_IGHV2-5*08	90.4	Mo_IGHV8-8*01	80	H1	15	H1-15-1	9	TFSGFSLSTAGMSVG	BBBLBBAAPPLPBBB
N	heavy	Mus.musculus	Hu_IGHV2-5*08	90.4	Mo_IGHV8-8*01	66.7	H2	9	H2-9-1	17	DIWWDDKKH	BBBAALPBB
N	heavy	Mus.musculus	Hu_IGHV2-5*08	90.4	Mo_IGHV	-1	H3	12	H3-12-*	-1	ARDMIFNFYFDV	BPBBAABPBPAB
O	kappa	Mus.musculus	Hu_IGKV1-5*01	100	Mo_IGKV4-59*01	80	L1	10	L1-10-1	8	SASSRVGYMH	BPABPBABBB
O	kappa	Mus.musculus	Hu_IGKV1-5*01	100	Mo_IGKV4-59*01	100	L2	8	L2-8-1	9	YDTSKLAS	BLLDPPPP
O	kappa	Mus.musculus	Hu_IGKV1-5*01	100	Mo_IGKV	-1	L3	9	L3-9-cis7-1	8	FQGSGYPFT	BBDABPpPB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019