PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 4XCN

#CDRs = 6; #Clusters = 10.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV1-69*01	86.3	Hu_IGHV1-69*01	76.9	H1	13	H1-13-1	37	KASGGSFSTYALS	PPBGGPDAABPBB
A	heavy	Homo.sapiens	Hu_IGHV1-69*01	86.3	Hu_IGHV1-69*01	40	H2	10	H2-10-1	16	GVIPLLTITN	BBPAAALPBB
A	heavy	Homo.sapiens	Hu_IGHV1-69*01	86.3	Hu_IGHV	-1	H3	20	H3-20-*	-1	AREGTTGWGWLGKPIGAFAH	BBPPBDBBGAAPPPDLPPAB
B	kappa	Homo.sapiens	Hu_IGKV3-20*01	94.2	Hu_IGKV3-20*01	66.7	L1	12	L1-12-2	11	RASQSVGNNKLA	BPABPPPLLPBB
B	kappa	Homo.sapiens	Hu_IGKV3-20*01	94.2	Hu_IGKV3-20*01	75	L2	8	L2-8-1	16	YGASSRPS	BLLDPBPP
B	kappa	Homo.sapiens	Hu_IGKV3-20*01	94.2	Hu_IGKV	-1	L3	9	L3-9-2	20	QQYGQSLST	BBDABAPPB
C	heavy	Homo.sapiens	Hu_IGHV1-69*01	86.3	Hu_IGHV1-69*01	76.9	H1	13	H1-13-1	36	KASGGSFSTYALS	PPBGGPAAABPBB
C	heavy	Homo.sapiens	Hu_IGHV1-69*01	86.3	Hu_IGHV1-69*01	40	H2	10	H2-10-1	16	GVIPLLTITN	BBPAADLPBB
C	heavy	Homo.sapiens	Hu_IGHV1-69*01	86.3	Hu_IGHV	-1	H3	20	H3-20-cis12-*	-1	AREGTTGWGWLGKPIGAFAH	BBPPBDPBGABgBPDLPPAB
D	kappa	Homo.sapiens	Hu_IGKV3-20*01	94.2	Hu_IGKV3-20*01	66.7	L1	12	L1-12-1	34	RASQSVGNNKLA	BPABPPPGAPBB
D	kappa	Homo.sapiens	Hu_IGKV3-20*01	94.2	Hu_IGKV3-20*01	75	L2	8	L2-8-1	16	YGASSRPS	BLLDPBPP
D	kappa	Homo.sapiens	Hu_IGKV3-20*01	94.2	Hu_IGKV	-1	L3	9	L3-9-2	20	QQYGQSLST	BBDABAPPB
E	heavy	Homo.sapiens	Hu_IGHV1-69*01	86.3	Hu_IGHV1-69*01	76.9	H1	13	H1-13-1	29	KASGGSFSTYALS	PPBGPPAAABPBB
E	heavy	Homo.sapiens	Hu_IGHV1-69*01	86.3	Hu_IGHV1-69*01	40	H2	10	H2-10-1	17	GVIPLLTITN	BBBAADLPBB
F	kappa	Homo.sapiens	Hu_IGKV3-20*01	94.2	Hu_IGKV3-20*01	66.7	L1	12	L1-12-2	12	RASQSVGNNKLA	BPABPPPLLPBB
F	kappa	Homo.sapiens	Hu_IGKV3-20*01	94.2	Hu_IGKV3-20*01	75	L2	8	L2-8-1	16	YGASSRPS	BLLDPBPP
F	kappa	Homo.sapiens	Hu_IGKV3-20*01	94.2	Hu_IGKV	-1	L3	9	L3-9-2	20	QQYGQSLST	BBDABAPPB
G	heavy	Homo.sapiens	Hu_IGHV1-69*01	86.3	Hu_IGHV1-69*01	76.9	H1	13	H1-13-*	-1	KASGGSFSTYALS	PPBGGPAGABPBB
G	heavy	Homo.sapiens	Hu_IGHV1-69*01	86.3	Hu_IGHV1-69*01	40	H2	10	H2-10-6	21	GVIPLLTITN	BBPAPLLPBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*01	86.3	Hu_IGHV1-69*01	76.9	H1	13	H1-13-1	37	KASGGSFSTYALS	PPBGGPAAABPBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*01	86.3	Hu_IGHV1-69*01	40	H2	10	H2-10-1	19	GVIPLLTITN	BBPAADLBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*01	86.3	Hu_IGHV	-1	H3	20	H3-20-*	-1	AREGTTGWGWLGKPIGAFAH	BBPPBBGBGADPBPDLPPAB
I	kappa	Homo.sapiens	Hu_IGKV3-20*01	94.2	Hu_IGKV3-20*01	66.7	L1	12	L1-12-2	13	RASQSVGNNKLA	BPABPPPLLPBB
I	kappa	Homo.sapiens	Hu_IGKV3-20*01	94.2	Hu_IGKV3-20*01	75	L2	8	L2-8-1	16	YGASSRPS	BLLDPBPP
I	kappa	Homo.sapiens	Hu_IGKV3-20*01	94.2	Hu_IGKV	-1	L3	9	L3-9-2	20	QQYGQSLST	BBDABAPPB
J	heavy	Homo.sapiens	Hu_IGHV1-69*01	86.3	Hu_IGHV1-69*01	76.9	H1	13	H1-13-1	37	KASGGSFSTYALS	PPBGGPDAABPBB
J	heavy	Homo.sapiens	Hu_IGHV1-69*01	86.3	Hu_IGHV1-69*01	40	H2	10	H2-10-1	16	GVIPLLTITN	BBPAADLPBB
K	kappa	Homo.sapiens	Hu_IGKV3-20*01	94.2	Hu_IGKV3-20*01	66.7	L1	12	L1-12-2	34	RASQSVGNNKLA	BPABPAGLLPBB
K	kappa	Homo.sapiens	Hu_IGKV3-20*01	94.2	Hu_IGKV3-20*01	75	L2	8	L2-8-1	16	YGASSRPS	BLLDPBPP
K	kappa	Homo.sapiens	Hu_IGKV3-20*01	94.2	Hu_IGKV	-1	L3	9	L3-9-2	20	QQYGQSLST	BBDABAPPB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	94.2	Hu_IGKV3-20*01	66.7	L1	12	L1-12-2	12	RASQSVGNNKLA	BPABPPPLLPBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	94.2	Hu_IGKV3-20*01	75	L2	8	L2-8-1	16	YGASSRPS	BLLDPBPP
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	94.2	Hu_IGKV	-1	L3	9	L3-9-2	20	QQYGQSLST	BBDABAPPB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019