PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 4R96

#CDRs = 6; #Clusters = 11.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Lama.glama	La_IGKV4-1*01	89.9	La_IGKV4-1*01	94.1	L1	17	L1-17-1	10	KSSQSVLFSSNQKNYLA	BBABPAPPAAALBPPBB
A	kappa	Lama.glama	La_IGKV4-1*01	89.9	La_IGKV4-1*01	87.5	L2	8	L2-8-1	10	YWASIRES	BLLDPPPP
A	kappa	Lama.glama	La_IGKV4-1*01	89.9	La_IGKV	-1	L3	9	L3-9-cis7-1	12	QQGYSFPYS	BPDABPpPB
B	heavy	Lama.glama	Al_IGHV1S6*01	95.9	Al_IGHV1S6*01	69.2	H1	13	H1-13-cis5,8-*	-1	KASGYIFTMNSID	PBPBgBPbLBPBB
B	heavy	Lama.glama	Al_IGHV1S6*01	95.9	Al_IGHV1S6*01	100	H2	10	H2-10-1	29	RIDPEDGGTK	BBBAABLPBB
B	heavy	Lama.glama	Al_IGHV1S6*01	95.9	Al_IGHV	-1	H3	12	H3-12-cis10-*	-1	ARVDDYYLGYDY	BPPPABGPGbAB
C	kappa	Lama.glama	La_IGKV4-1*01	89.9	La_IGKV4-1*01	94.1	L1	17	L1-17-1	9	KSSQSVLFSSNQKNYLA	BBABPAPPAAALBPPBB
C	kappa	Lama.glama	La_IGKV4-1*01	89.9	La_IGKV4-1*01	87.5	L2	8	L2-8-1	16	YWASIRES	BLLDPBPP
C	kappa	Lama.glama	La_IGKV4-1*01	89.9	La_IGKV	-1	L3	9	L3-9-cis7-1	11	QQGYSFPYS	BPDABPpPB
D	heavy	Lama.glama	Al_IGHV1S6*01	95.9	Al_IGHV1S6*01	69.2	H1	13	H1-13-cis2-*	-1	KASGYIFTMNSID	BlDADLPDDBPBB
D	heavy	Lama.glama	Al_IGHV1S6*01	95.9	Al_IGHV1S6*01	100	H2	10	H2-10-1	30	RIDPEDGGTK	BBPAABLPBB
D	heavy	Lama.glama	Al_IGHV1S6*01	95.9	Al_IGHV	-1	H3	12	H3-12-cis8-*	-1	ARVDDYYLGYDY	BPBBAPBbBPAB
E	kappa	Lama.glama	La_IGKV4-1*01	89.9	La_IGKV4-1*01	94.1	L1	17	L1-17-1	9	KSSQSVLFSSNQKNYLA	BBABPAPPAAALBPPBB
E	kappa	Lama.glama	La_IGKV4-1*01	89.9	La_IGKV4-1*01	87.5	L2	8	L2-8-1	9	YWASIRES	BLLDPPPP
E	kappa	Lama.glama	La_IGKV4-1*01	89.9	La_IGKV	-1	L3	9	L3-9-cis7-1	12	QQGYSFPYS	BPDABPpPB
F	heavy	Lama.glama	Al_IGHV1S6*01	95.9	Al_IGHV1S6*01	69.2	H1	13	H1-13-cis9-*	-1	KASGYIFTMNSID	PPBLBPPBlBPBB
F	heavy	Lama.glama	Al_IGHV1S6*01	95.9	Al_IGHV1S6*01	100	H2	10	H2-10-1	27	RIDPEDGGTK	PBPAABLPBB
F	heavy	Lama.glama	Al_IGHV1S6*01	95.9	Al_IGHV	-1	H3	12	H3-12-*	-1	ARVDDYYLGYDY	BPPBPDPPBBAB
H	heavy	Lama.glama	Al_IGHV1S6*01	95.9	Al_IGHV1S6*01	69.2	H1	13	H1-13-1	37	KASGYIFTMNSID	PPBLBPPLDBPBB
H	heavy	Lama.glama	Al_IGHV1S6*01	95.9	Al_IGHV1S6*01	100	H2	10	H2-10-1	29	RIDPEDGGTK	BBBAABLPBB
H	heavy	Lama.glama	Al_IGHV1S6*01	95.9	Al_IGHV	-1	H3	12	H3-12-cis8-*	-1	ARVDDYYLGYDY	BPBPABGpBBAB
L	kappa	Lama.glama	La_IGKV4-1*01	89.9	La_IGKV4-1*01	94.1	L1	17	L1-17-1	9	KSSQSVLFSSNQKNYLA	BBABPAPPAAALBPPBB
L	kappa	Lama.glama	La_IGKV4-1*01	89.9	La_IGKV4-1*01	87.5	L2	8	L2-8-1	10	YWASIRES	BLLDPPPP
L	kappa	Lama.glama	La_IGKV4-1*01	89.9	La_IGKV	-1	L3	9	L3-9-cis7-1	11	QQGYSFPYS	BPDABPpPB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019