PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 4F2M

#CDRs = 6; #Clusters = 6.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Mus.musculus	Mo_IGHV1-82*01	93.2	Mo_IGHV1-82*01	100	H1	13	H1-13-1	12	KASGYAFSSSWMN	PBBLBPAADBPBP
A	heavy	Mus.musculus	Mo_IGHV1-82*01	93.2	Mo_IGHV1-82*01	90	H2	10	H2-10-1	23	RIYPGDGETN	BBPAADLPBB
A	heavy	Mus.musculus	Mo_IGHV1-82*01	93.2	Mo_IGHV	-1	H3	15	H3-15-*	-1	ARGGYRYDPYYAMDY	BPBPPAAPADPPPAB
B	kappa	Mus.musculus	Mo_IGKV5-48*01	94.2	Mo_IGKV5-48*01	100	L1	11	L1-11-1	11	RASQSIGTSIH	BPABPDGDPBB
B	kappa	Mus.musculus	Mo_IGKV5-48*01	94.2	Mo_IGKV5-48*01	100	L2	8	L2-8-1	34	KYASESIS	BLLLPPBP
B	kappa	Mus.musculus	Mo_IGKV5-48*01	94.2	Mo_IGKV	-1	L3	9	L3-9-cis7-1	18	QQTDSWPTT	BPDAPPpPB
C	heavy	Mus.musculus	Mo_IGHV1-82*01	93.2	Mo_IGHV1-82*01	100	H1	13	H1-13-1	16	KASGYAFSSSWMN	PBBLBPAADBPBP
C	heavy	Mus.musculus	Mo_IGHV1-82*01	93.2	Mo_IGHV1-82*01	90	H2	10	H2-10-1	22	RIYPGDGETN	BBBAAALPBB
C	heavy	Mus.musculus	Mo_IGHV1-82*01	93.2	Mo_IGHV	-1	H3	15	H3-15-*	-1	ARGGYRYDPYYAMDY	BPBPPPLPADPPPAB
D	kappa	Mus.musculus	Mo_IGKV5-48*01	94.2	Mo_IGKV5-48*01	100	L1	11	L1-11-1	12	RASQSIGTSIH	BPABPDGDPBB
D	kappa	Mus.musculus	Mo_IGKV5-48*01	94.2	Mo_IGKV5-48*01	100	L2	8	L2-8-1	21	KYASESIS	BLLDPPBP
D	kappa	Mus.musculus	Mo_IGKV5-48*01	94.2	Mo_IGKV	-1	L3	9	L3-9-cis7-1	16	QQTDSWPTT	BBDAPPpPB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019