PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 3PJS

#CDRs = 6; #Clusters = 7.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Mus.musculus	Hu_IGKV1D-39*01	98.5	Mo_IGKV6-17*01	81.8	L1	11	L1-11-*	-1	RASQDVNTAVA	PPABPBDDAPB
A	kappa	Mus.musculus	Hu_IGKV1D-39*01	98.5	Mo_IGKV6-17*01	50	L2	8	L2-8-*	-1	YSASFLES	DPAAPPPA
A	kappa	Mus.musculus	Hu_IGKV1D-39*01	98.5	Mo_IGKV	-1	L3	11	L3-11-cis9-*	-1	QQYYSYSAPVT	BBDAPAPBbBB
B	heavy	Mus.musculus	Hu_IGHV3-64*04	91.8	Hu_IGHV3-64*04	61.5	H1	13	H1-13-1	32	AASGFNISSYSIH	PPBDBPAADBBBB
B	heavy	Mus.musculus	Hu_IGHV3-64*04	91.8	Hu_IGHV3-64*04	60	H2	10	H2-10-1	38	SISSYYSSTY	BBBAAPAPBB
B	heavy	Mus.musculus	Hu_IGHV3-64*04	91.8	Hu_IGHV	-1	H3	17	H3-17-*	-1	ARQPSYHMYSWWVALDY	BBBPPPDDDAAAPBPAB
C	kappa	Mus.musculus	Hu_IGKV1D-39*01	98.5	Mo_IGKV6-17*01	81.8	L1	11	L1-11-*	-1	RASQDVNTAVA	BBABPBDDAPB
C	kappa	Mus.musculus	Hu_IGKV1D-39*01	98.5	Mo_IGKV6-17*01	50	L2	8	L2-8-*	-1	YSASFLES	DPAAPPPA
C	kappa	Mus.musculus	Hu_IGKV1D-39*01	98.5	Mo_IGKV	-1	L3	11	L3-11-*	-1	QQYYSYSAPVT	BBDAPDABDPB
D	heavy	Mus.musculus	Hu_IGHV3-64*04	91.8	Hu_IGHV3-64*04	61.5	H1	13	H1-13-1	32	AASGFNISSYSIH	PPBDBPAADBBBB
D	heavy	Mus.musculus	Hu_IGHV3-64*04	91.8	Hu_IGHV3-64*04	60	H2	10	H2-10-1	39	SISSYYSSTY	BBBAAPAPBB
D	heavy	Mus.musculus	Hu_IGHV3-64*04	91.8	Hu_IGHV	-1	H3	17	H3-17-*	-1	ARQPSYHMYSWWVALDY	BBBPPPDDDAAABDBAB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019