PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 2R9H

#CDRs = 6; #Clusters = 7.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Mus.musculus	Mo_IGHV4-1*02	94.4	Mo_IGHV4-1*02	92.3	H1	13	H1-13-4	18	AASGFDYSRYWMS	PPBLBPAPLPPBB
C	heavy	Mus.musculus	Mo_IGHV4-1*02	94.4	Mo_IGHV4-1*02	90	H2	10	H2-10-2	16	EINPVSSTIN	BBPAALABBB
C	heavy	Mus.musculus	Mo_IGHV4-1*02	94.4	Mo_IGHV	-1	H3	14	H3-14-*	-1	ARLYYGYGYWYFDV	BPPBBDALPPBBAB
D	kappa	Mus.musculus	Mo_IGKV4-59*01	91.3	Mo_IGKV4-59*01	90	L1	10	L1-10-2	24	SASSSVSYIH	BBAPPBBLPB
D	kappa	Mus.musculus	Mo_IGKV4-59*01	91.3	Mo_IGKV4-59*01	87.5	L2	8	L2-8-1	23	YDTSKLTS	BLLBBPBP
D	kappa	Mus.musculus	Mo_IGKV4-59*01	91.3	Mo_IGKV	-1	L3	9	L3-9-cis7-1	13	QQWSSHPQT	BBDABBpPB
E	heavy	Mus.musculus	Mo_IGHV4-1*02	94.4	Mo_IGHV4-1*02	92.3	H1	13	H1-13-1	21	AASGFDYSRYWMS	PBBLBPAPDBPBB
E	heavy	Mus.musculus	Mo_IGHV4-1*02	94.4	Mo_IGHV4-1*02	90	H2	10	H2-10-2	18	EINPVSSTIN	BBPAALABBB
E	heavy	Mus.musculus	Mo_IGHV4-1*02	94.4	Mo_IGHV	-1	H3	14	H3-14-*	-1	ARLYYGYGYWYFDV	BPPBBDALPPBPAB
F	kappa	Mus.musculus	Mo_IGKV4-59*01	91.3	Mo_IGKV4-59*01	90	L1	10	L1-10-2	29	SASSSVSYIH	BBABBBBLBB
F	kappa	Mus.musculus	Mo_IGKV4-59*01	91.3	Mo_IGKV4-59*01	87.5	L2	8	L2-8-1	8	YDTSKLTS	BLGDPPPP
F	kappa	Mus.musculus	Mo_IGKV4-59*01	91.3	Mo_IGKV	-1	L3	9	L3-9-cis7-1	14	QQWSSHPQT	BBDABBpPB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019