PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 1HQ4

#CDRs = 6; #Clusters = 6.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Mus.musculus	Mo_IGKV4-79*01	94.2	Mo_IGKV4-79*01	83.3	L1	12	L1-12-1	11	SASSSVSSNYVY	BBABPBPAADBB
A	kappa	Mus.musculus	Mo_IGKV4-79*01	94.2	Mo_IGKV4-79*01	100	L2	8	L2-8-1	14	YSTSNLAS	BLLDBPPP
A	kappa	Mus.musculus	Mo_IGKV4-79*01	94.2	Mo_IGKV	-1	L3	9	L3-9-cis7-1	19	LQWSSFPYT	BBBDBPpPB
B	heavy	Mus.musculus	Mo_IGHV3-1*02	98.6	Mo_IGHV3-1*02	85.7	H1	14	H1-14-1	10	TVTGYSITSGYAWN	PPBLBPAAABGBBP
B	heavy	Mus.musculus	Mo_IGHV3-1*02	98.6	Mo_IGHV3-1*02	66.7	H2	9	H2-9-1	7	YIRYSGDTR	BBPAALPBB
B	heavy	Mus.musculus	Mo_IGHV3-1*02	98.6	Mo_IGHV	-1	H3	9	H3-9-*	-1	AIGYGNSDY	BBBBGABBB
C	kappa	Mus.musculus	Mo_IGKV4-79*01	94.2	Mo_IGKV4-79*01	83.3	L1	12	L1-12-1	11	SASSSVSSNYVY	BBABPBPAADBB
C	kappa	Mus.musculus	Mo_IGKV4-79*01	94.2	Mo_IGKV4-79*01	100	L2	8	L2-8-1	13	YSTSNLAS	BLGDBPPP
C	kappa	Mus.musculus	Mo_IGKV4-79*01	94.2	Mo_IGKV	-1	L3	9	L3-9-cis7-1	19	LQWSSFPYT	BBBDBPpPB
D	heavy	Mus.musculus	Mo_IGHV3-1*02	98.6	Mo_IGHV3-1*02	85.7	H1	14	H1-14-1	9	TVTGYSITSGYAWN	PPBLBPAAABGBBP
D	heavy	Mus.musculus	Mo_IGHV3-1*02	98.6	Mo_IGHV3-1*02	66.7	H2	9	H2-9-1	7	YIRYSGDTR	BBPAALPBB
D	heavy	Mus.musculus	Mo_IGHV3-1*02	98.6	Mo_IGHV	-1	H3	9	H3-9-*	-1	AIGYGNSDY	BBBBGABBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019